SWI/SNF InfoBase

HELP

User Guide
The SWI/SNF Infobase provides the Browse, Taxonomy browser, Search, Blast and Download options

Browse:
The browse option provided on the home page enables listing of subunits from BAF and PBAF sub-complexes of specific organisms. Users can navigate to subunit information page upon selection of a specific subunit from the subunit list and the subunit cartoon provided on the home page.

Search:
The user can input specific ids such as UniProt ID, RefSeq Protein ID and NCBI Gene ID to obtain information on specific subunit. The advanced Search option provided facilitate the search by subunit name, protein name, Gene symbol, Pfam ID and Domain name of selected organisms.

Taxonomy Browser:
Using the taxonomy browser, users can list and navigate to the gene, subunit and transcript information of different organisms.

BLAST
The blast option provided to facilitate a protein sequence based search using the SWI/SNF database. The user will be able to identify the related homologues of the sequence of interest from SWI/SNF Infobase and PDB database.

Download
Using the download option, the user can download the list of genes and transcripts of the specific organism from SWI/SNF Infobase.

For suggestions and comments: swisnfdb@gmail.com